Candidates
To apply to the FdV PhD program, you need to choose your phD project (1 single project per candidate) and then prepare your candidature with your future supervisor in the hosting lab (and he must give you his recommendation letter).
You may find ideas of thesis subjects among the labs' proposals below or else prepare a new one with any Paris region laboratory (you may consult the list of labs that have already hosted an FdV fellow since 2007).
Then you must fill in the application form on line (sending all mandatory information and uploads) before the Monday April 23rd 2012 deadline.
Laboratories : you may submit (password = fdvlab) your phd proposal
After internal validation, it will be published below.
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Date : 16/04/2012
Laboratory
Institute of Systems and Synthetic Biology
UPS3509, CNRS
Bâtiment Geneavenir 6
5 rue Henri Desbruères
91030 Evry Cedex
Website
Main discipline : Synthetic Biology
Lab director : Jean Loup Faulon
PhD Supervisor
Alfonso Jaramillo
email:
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phone: +33 1 69 47 44 44
Subjects
1.: Synthetic Biology
2.: Microfluidics
3.: Biophysics
Tools and Methodologies
1.: Biotechnology
2.: Microfluidics
3.: Computational Biology
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Date : 11/04/2012
Laboratory
UMR de Génétique Végétale du Moulon
UMR320 / UMR8120, INRA / Universite Paris-Sud / CNRS
Ferme du Moulon
91190 Gif-sur-Yvette
Website
Main discipline : Molecular Genetics
Lab director : M. Dominique de Vienne
PhD Supervisor
Olivier MARTIN
email:
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phone: +33 1 69 33 23 36
Subjects
1.: gene regulation
2.: metabolism
3.: systems biology
Tools and Methodologies
1.: modelling
2.: networks
3.: theory
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Date : 05/04/2012
Laboratory
Institut Jean-Pierre Bourgin
UMR1318, INRA-AgroParisTech
INRA, Centre de recherche de Versailles-Grignon
Route de Saint-Cyr (RD10)
78026 Versailles
Website
Main discipline : Computer Sciences
Lab director : David Bouchez
PhD Supervisor
Philippe Andrey
email:
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phone: +33 1 30 83 33 50
Subjects
1.: Plant organ growth
2.: Cellular wall mechanics
3.: Hormone signalling
Tools and Methodologies
1.: Computational modeling
2.: Image processing and analysis
3.: Parallel programming
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Date : 04/04/2012
Laboratory
Laboratoire de Physique Statistique
UMR8550, CNRS, P6, P7
24 rue Lhomond
75005 Paris
Website
Main discipline : Biophysics
Lab director : Eric Perez
PhD Supervisor
Nicolas Desprat
email:
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phone: +33 1 44 32 34 96
Subjects
1.: cell-cell intercation
2.: adhesion
3.: mechanical constraints
Tools and Methodologies
1.: image analysis
2.: laser ablation
3.: traction force microscopy
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Date : 30/03/2012
Laboratory
Nuclear Dynamic and DNA repair (LDNR)
IRCM/SIGRR, CEA
18 route du Panorama
92265 Fontenay aux Roses
Website
Main discipline : Cell Biology
Lab director : Karine Dubrana
PhD Supervisor
Karine Dubrana
email:
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phone: +33 1 46 54 93 43
Subjects
1.: Chromatin Dynamics
2.: DNA repair
3.: Yeast
Tools and Methodologies
1.: Genetics
2.: Microscopy
3.: Image analysis
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Date : 29/03/2012
Laboratory
Laboratory of Evolutive and Medical Molecular Genetics
INSERM U1001
Centre de recherche interdisciplinaire, Faculty of medicine, University Paris Descartes
24 rue du faubourg Saint Jacques
75014 Paris
Website
Main discipline : Systems Biology
Lab director : Ivan Matic
PhD Supervisors
François Taddei
email:
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phone: +33 1 44 41 25 20
Subjects
1.: aging
2.: systems biology
3.: scientific discovery games
Tools and Methodologies
1.: quantitative data analysis
2.: novel mobile technologies
3.: scientific discovery games
This project has applied for a european funding (Marie Curie FP7 ITN IDP 2012)
within the "Wiser Games" Innovative Doctoral Program of the FdV School.
* Eligible candidates under ITN IDP regulations :
- Early Stage Researchers must be (at the time of recruitment by the host organization) : in the first four years (full-time equivalent) of their research careers and not yet have been awarded a doctoral degree. This is measured from the date when they obtained the degree which would formally entitle them to embark on a doctorate, either in the country in which the degree was obtained or in the country in which the research training is provided, irrespective of whether or not a doctorate is envisaged.
- At the time of recruitment by the host organization, researchers must not have resided or carried out their main activity (work, studies, etc) in the country of their host organization for more than 12 months in the 3 years immediately prior to the reference date.
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Date : 29/03/2012
Laboratory
Laboratory of Evolutive and Medical Molecular Genetics
INSERM U1001
Centre de recherche interdisciplinaire, Faculty of medicine, University Paris Descartes
24 rue du faubourg Saint Jacques
75014 Paris
Website
Main discipline : Systems Biology
Lab director : Ivan Matic
PhD Supervisors
François Taddei / Laurent Keller
email:
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phone: +33 1 44 41 25 20
Subjects
1.: evolutionary mechanisms
2.: robotics
3.: scientific discovery games
Tools and Methodologies
1.: evolutionary algorithms
2.: open source technology
3.: scientific discovery games
This project has applied for a european funding (Marie Curie FP7 ITN IDP 2012)
within the "Wiser Games" Innovative Doctoral Program of the FdV School.
* Eligible candidates under ITN IDP regulations :
- Early Stage Researchers must be (at the time of recruitment by the host organization) : in the first four years (full-time equivalent) of their research careers and not yet have been awarded a doctoral degree. This is measured from the date when they obtained the degree which would formally entitle them to embark on a doctorate, either in the country in which the degree was obtained or in the country in which the research training is provided, irrespective of whether or not a doctorate is envisaged.
- At the time of recruitment by the host organization, researchers must not have resided or carried out their main activity (work, studies, etc) in the country of their host organization for more than 12 months in the 3 years immediately prior to the reference date.
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Date : 27/03/2012
Laboratory
Pathophysiology of psychiatric disorders
UMR 894 / INSERM, Université Paris Descartes
Centre de Psychiatrie et Neurosciences
2ter rue d'Alésia
75014 Paris
Website
Main discipline : Neurophysiology
Lab director : Therese M. Jay
PhD Supervisor
Bill W. Godsil
email:
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phone: +33 1 40 78 86 67
Subjects
1.: prefrontal cortex
2.: extinction
3.: stress
Tools and Methodologies
1.: optogenetic
2.: behavior
3.: electrophysiology
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Date : 27/03/2012
Laboratory
NEUROGLIAL INTERACTIONS IN CEREBRAL PHYSIOPATHOLOGY
INSERM U1050 / CNRS UMR 7241
Collège de France
Centre Interdisciplinaire de Recherche en Biologie
11 place Marcelin Berthelot
75005 Paris
Website
Main discipline : Neurophysiology
Lab director : Nathalie Rouach
PhD Supervisor
Nathalie Rouach
email:
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Subjects
1.: astrocytes
2.: neuroglial interactions
3.: synapse
Tools and Methodologies
1.: electrophysiology
2.: mathematical modeling
3.: molecular biology
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Date : 23/03/2012
Laboratory
IMPMC, Geomicrobiology team
UMR 7590, CNRS, UPMC
Case 115
4 place Jussieu
75005 Paris
Website
Main discipline : Geology / Geophysics
Lab director : Bernard Capelle
PhD Supervisor
Karim Benzerara
email:
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phone: +33 1 44 27 75 42
Subjects
1.: Biomineralization
2.: Microbial phosphatases
3.: Sequence-structure-function relationships
Tools and Methodologies
1.: Sequence analysis (proteins, genomes, metagenomes)
2.: Molecular evolution
3.: Molecular modeling
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Date : 22/03/2012
Laboratory
Matières et Systèmes Complexes
UMR 7057, CNRS, Univ Paris Diderot, Sorbonne Paris Cité
Département de Physique Laboratoire MSC Bâtiment Condorcet
Case courrier : 7056 - pièce 808A
75205 Cedex 13 Paris
Website
Main discipline : Physics
Lab director : Loic Auvray
PhD Supervisors
Samuel Bottani
email :
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phone: +33 1 57 27 62 85
Subjects
1.: scientific games
2.: network science
3.: system biology
Tools and Methodologies
1.: programming
2.: internet
3.: games
This project has applied for a european funding (Marie Curie FP7 ITN IDP 2012)
within the "Wiser Games" Innovative Doctoral Program of the FdV School.
* Eligible candidates under ITN IDP regulations :
- Early Stage Researchers must be (at the time of recruitment by the host organization) : in the first four years (full-time equivalent) of their research careers and not yet have been awarded a doctoral degree. This is measured from the date when they obtained the degree which would formally entitle them to embark on a doctorate, either in the country in which the degree was obtained or in the country in which the research training is provided, irrespective of whether or not a doctorate is envisaged.
- At the time of recruitment by the host organization, researchers must not have resided or carried out their main activity (work, studies, etc) in the country of their host organization for more than 12 months in the 3 years immediately prior to the reference date.
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Date : 22/03/2012
Laboratory
INRA MICALIS Institute team: CPE "Commensalims and Pathogeny of Enterococci" (France)
KTH Royal Institute of Technology team: Computational Biology Numerical Analysis and Computing Science (Sweden)
UMR1319, INRA
Domaine de Vilvert - Bat. 222
78352 Jouy-en-Josas
Website and Website
Main discipline : Synthetic Biology
Lab director : Stéphane Aymerich
PhD Supervisor
Francis Repoila
phone: +33 1 34 65 20 69
Subjects
1.: Bacterial gene expression control
2.: Synthetic biology/Modeling
3.: RNA metabolism
Tools and Methodologies
1.: Bacterial genetics and physiology
2.: .RNA sequencing & biochemistry
3.: Mathematical modeling & statistics
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Date : 15/03/2012
Laboratory
Laboratoire de Biochimie Théorique
UPR 9080, CNRS, Univ Paris Diderot, Sorbonne Paris Cité
IBPC, 13 rue Pierre et Marie Curie
75005 Paris
Website
Main discipline : Biophysics
Lab director : Philippe Derremeaux
PhD Supervisors
Marc Baaden / Antoine Taly
email :
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phone: +33 0 6 09 84 32 17 / +33 1 58 41 51 66
Subjects
1.: Molecular visualization
2.: Structural biology
3.: Molecular properties and classification
Tools and Methodologies
1.: Unity3D game engine
2.: Prototyping platform
3.: BioBlender
This project has applied for a european funding (Marie Curie FP7 ITN IDP 2012)
within the "Wiser Games" Innovative Doctoral Program of the FdV School.
* Eligible candidates under ITN IDP regulations :
- Early Stage Researchers must be (at the time of recruitment by the host organization) : in the first four years (full-time equivalent) of their research careers and not yet have been awarded a doctoral degree. This is measured from the date when they obtained the degree which would formally entitle them to embark on a doctorate, either in the country in which the degree was obtained or in the country in which the research training is provided, irrespective of whether or not a doctorate is envisaged.
- At the time of recruitment by the host organization, researchers must not have resided or carried out their main activity (work, studies, etc) in the country of their host organization for more than 12 months in the 3 years immediately prior to the reference date.
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Date : 15/03/2012
Laboratory
Team Translational Research And Microfluidics
UMR-S775 INSERM-Université Paris-Descartes
45 rue des Saints-Pères
75270 Paris
Website
Main discipline : Molecular Genetics
Lab director : Pierre Laurent-Puig
PhD Supervisor
Valerie Taly
email :
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phone: +33 1 70 64 99 54
Subjects
1.: Microfluidics
2.: High throughput screening
3.: Science discovery game
Tools and Methodologies
1.: Microfluidics
2.: Molecular biology/ Biochemistry
3.: Image processing
This project has applied for a european funding (Marie Curie FP7 ITN IDP 2012)
within the "Wiser Games" Innovative Doctoral Program of the FdV School.
* Eligible candidates under ITN IDP regulations :
- Early Stage Researchers must be (at the time of recruitment by the host organization) : in the first four years (full-time equivalent) of their research careers and not yet have been awarded a doctoral degree. This is measured from the date when they obtained the degree which would formally entitle them to embark on a doctorate, either in the country in which the degree was obtained or in the country in which the research training is provided, irrespective of whether or not a doctorate is envisaged.
- At the time of recruitment by the host organization, researchers must not have resided or carried out their main activity (work, studies, etc) in the country of their host organization for more than 12 months in the 3 years immediately prior to the reference date.
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Date : 15/03/2012
Laboratory
Team Translational Research And Microfluidics
UMR-S775 INSERM-Université Paris-Descartes
45 rue des Saints-Pères
75270 Paris
Website
Main discipline : Molecular Genetics
Lab director : Pierre Laurent-Puig
PhD Supervisor
Valerie Taly
email :
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phone: +33 1 70 64 99 54
Subjects
1.: Cancer/ Tumor development
2.: High throughput screening
3.: Prototype of « Cell battle » game
Tools and Methodologies
1.: Microfluidics
2.: Cell biology
3.: Image processing
This project has applied for a european funding (Marie Curie FP7 ITN IDP 2012)
within the "Wiser Games" Innovative Doctoral Program of the FdV School.
* Eligible candidates under ITN IDP regulations :
- Early Stage Researchers must be (at the time of recruitment by the host organization) : in the first four years (full-time equivalent) of their research careers and not yet have been awarded a doctoral degree. This is measured from the date when they obtained the degree which would formally entitle them to embark on a doctorate, either in the country in which the degree was obtained or in the country in which the research training is provided, irrespective of whether or not a doctorate is envisaged.
- At the time of recruitment by the host organization, researchers must not have resided or carried out their main activity (work, studies, etc) in the country of their host organization for more than 12 months in the 3 years immediately prior to the reference date.
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Date : 13/03/2012
Laboratory
Laboratoire de Biochimie Théorique
UPR 9080, CNRS
13 rue Pierre et Marie Curie
75005 Paris
Website
Main discipline : Bioinformatics
Lab director : Philippe Derremeaux
PhD Supervisor
Antoine Taly
email :
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phone: +33 1 58 41 51 66
Subjects
1.: protein conformational changes
2.: low energy path
3.: scientific discovery game
Tools and Methodologies
1.: normal mode analysis
2.: network analysis
This project has applied for a european funding (Marie Curie FP7 ITN IDP 2012)
within the "Wiser Games" Innovative Doctoral Program of the FdV School.
* Eligible candidates under ITN IDP regulations :
- Early Stage Researchers must be (at the time of recruitment by the host organization) : in the first four years (full-time equivalent) of their research careers and not yet have been awarded a doctoral degree. This is measured from the date when they obtained the degree which would formally entitle them to embark on a doctorate, either in the country in which the degree was obtained or in the country in which the research training is provided, irrespective of whether or not a doctorate is envisaged.
- At the time of recruitment by the host organization, researchers must not have resided or carried out their main activity (work, studies, etc) in the country of their host organization for more than 12 months in the 3 years immediately prior to the reference date.
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Date : 09/03/2012
Laboratory
Genes and blood pressure - Genetic mechanisms of aldosterone-related disorders
U970, INSERM
Paris Cardiovascular Research Center - PARCC
Hôpital Européen Georges Pompidou- HEGP
56, rue Leblanc
75015 Paris
Website
Main discipline : Systems Biology
Lab director : Maria-Christina Zennaro
PhD Supervisor
Maria-Christina Zennaro
email :
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phone: +33 1 53 98 80 42
Subjects
1.: primary aldosteronism
2.: molecular genetics
3.: functional genomics
Tools and Methodologies
1.: bioinformatics
2.: high throughput genetics and genomics
3.: integrated data analysis
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Date : 27/02/2012
Laboratory
Immunity and Cancer
U932, Institut Curie
12 rue Lhomond
75011 Paris
Website
Main discipline : Cell Biology
Lab director : Sebastian Amigorena
PhD Supervisor
Nicolas Manel
email :
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phone: +33 1 56 24 64 33
Subjects
1.: Human immunology
2.: Virology (HIV)
3.: Synthetic biology/Modeling
Tools and Methodologies
1.: Cellular immunology/virology
2.: Gene expression/sequence analysis
3.: Biocomputing/Modeling
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Date : 10/02/2012
Laboratory
Group of computationaional biology and Applied Mathematics
IBENS, Ecole normale Superieure
46 rue d'Ulm
75005 Paris
Website
Main discipline : Biophysics
Lab director : David Holcman
PhD Supervisor
David Holcman
email :
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phone: +33 1 44 32 36 61
Subjects
1.: Analysis of superresolution trajectories
2.: HIV trafficking in cells
3.: Host-virus interactions
Tools and Methodologies
1.: acquisition of trajectories
2.: data analysis
3.: modeling, simulations
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Date : 01/02/2012
Impact of the introduced invasive bee-hawking Yellow-legged Hornet on plant-pollinator mutualistic networks
Laboratory
Conservation des Espèces, Restauration et Suivi des Populations
UMR7204, MNHN
55 rue Buffon
CP51
75005 Paris
Website
Main discipline : Ecology
Lab director : Denis Couvet
PhD Supervisor
Frédéric Jiguet
email :
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phone: +33 1 40 79 30 80
Subjects
1.: invasive species
2.: predation
3.: pollination
Tools and Methodologies
1.: modelling mutualistic networks
2.: determining diet with dna barcoding
3.: citizen science to record pollinator communities
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Date : 30/01/2012
Laboratory
Laboratory of Physiology of Perception and Action
UMR 7152, CNRS, Collège de France
11 place Marcelin Berthelot
75005 Paris
Website
Main discipline : Neurophysiology
Lab director : Mr Sidney Wiener
PhD Supervisor
Mr Sidney Wiener
email :
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phone: +33 1 44 27 16 21
Subjects
1.: Dynamics of interactions within brain circuits
2.: Neural basis of cognitive functions (decision, spatial navigation, set-shifting)
3.: Interfacing neurophysiology and neural network modelling for robotics
Tools and Methodologies
1.: recordings of ensembles of neurons in multiple structures in behaving rats
2.: analyses of temporal coding of spike and local field potential activity
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Date : 24/01/2012
Laboratory
BioEMCo, geochemistry team
UMR 7618, CNRS / UPMC
4 place Jussieu
75252 Paris cedex 05
Website
Main discipline : Chemistry
Lab director : Luc Abbadie
PhD Supervisor
Sylvie Derenne
email :
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phone: +33 1 44 27 35 14
Subjects
1.: cosmochemistry
2.: carbonaceous meteorite
3.: organic matter
Tools and Methodologies
1.: organic chemistry
2.: chemical analysis
3.: spectroscopy
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Date : 23/01/2012
Laboratory
I2D3 - Integrative Immunology: Differentiation, Diversity, Dynamics
UMR7211, "I3" Université Pierre et Marie Curie - Paris 6 & CNRS
Bâtiment CERVI, Sce Biothérapies (Pr. Klatzmann)
83 bd de l'Hôpital
75013 Paris
Website: www.i3-immuno.fr ; www.immunocomplexit.net
Main discipline : Systems Biology
Lab director : David Klatzmann
PhD Supervisor
Adrien SIX
email :
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phone: +33 1 42 17 65 11
Subjects
1.: Integrative immunology
2.: T-cell differentiation & cell dynamics
3.: Cell population & Repertoire diversity
Tools and Methodologies
1.: Integrative immunology
2.: T-cell differentiation & cell dynamics
3.: Cell population & Repertoire diversity
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Date : 23/01/2012
Laboratory
Systems Epigenomics
INSERM U955 INSERM / UPEC / CNRS
Institut Mondor de Recherche Biomédicale - Vaccine Research Institute
94010 Créteil
Website
Main discipline : Systems Biology
Lab director : Georges Guellaen
PhD Supervisor
Arndt Benecke
email :
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phone: +33 1 60 92 66 65
Subjects
1.: non-coding RNA
2.: chromatin
3.: HIV transcription, latency
Tools and Methodologies
1.: Next generation sequencing
2.: bioinformatics
3.: biochemistry
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Date : 20/12/2011
Laboratory
PMMH
UMR 7636 CNRS / ESPCI / UPMC / Paris Diderot
ESPCI, 10 rue Vauquelin
75005 Paris
Website
Main discipline : Physics
Lab director : Philippe Petitjeans
PhD Supervisor
Julien Heuvingh
email :
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phone: +33 1 40 79 47 08
Subjects
1.: Actin networks
2.: motility
3.: polymer mechanics
Tools and Methodologies
1.: video microscopy
2.: magnetic field
3.: reconstituted systems
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Date : 02/12/2011
Laboratory
Laboratoire de Biologie Physico-Chimique des Protéines Membranaires
UMR 7099 CNRS
IBPC
13 rue Pierre et Marie Curie
75005 Paris
Website
Main discipline : Biophysics
Lab director : Bruno MIROUX
PhD Supervisor
Dror WARSCHAWSKI
email :
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phone: +33 1 58 41 51 11
Subjects
1.: microbiology
2.: membrane biogenesis
3.: structural biology
Tools and Methodologies
1.: Nuclear Magnetic Resonance
2.: membrane biochemistry
3.: membrane protein expression
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Date : 18/10/2011
Laboratory
Subcellular structure and cellular dynamic - Compartimentation et dynamique cellulaires
UMR 144 CNRS-Institut Curie
26 rue d'Ulm
75248 Paris cedex 05
Website
Main discipline : Cell Biology
Lab director : Bruno Goud
PhD Supervisor
Jean-Baptiste Manneville
email :
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phone: +33 1 56 24 65 64
Subjects
1.: intracellular transport
2.: membrane mechanics
3.: cytoskeleton
Tools and Methodologies
1.: optical tweezers
2.: confocal microscopy
3.: microrheology
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Date : 01/04/2011
Laboratory
IBENS (from fall 2011 - presently at Institut Jacques Monod)`
UMR8197 / U124
ENS/CNRS/Inserm
46 rue d'Ulm
75005 Paris
Website : http://www.ijm.fr/en/ijm/research/research-groups/nematode/
Lab director : Marie-Anne Félix
PhD Supervisor
Marie-Anne Félix
email :
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phone : +33-1-57-27-80-67
Subjects
1.: co-evolution
2.: host-pathogen interactions
3.: small RNAs
Tools and methodologies
1.: experimental evolution
2.: molecular biology
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Date : 06/04/2011
Laboratory
Epigenetic and Cancer
CNRS FRE 3377
CEA Saclay Bat 144
91191 Gif Sur Yvette cedex
Director : Annick Harel-Bellan
Main disciplin : Molecular Biology
Website :http://www.vjf.cnrs.fr/newial/eng/recherche/FRE2944HarelBellan.php
PhD Supervisor 1
Annick Harel-Bellan
email :
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phone : +33 169083586
PhD Supervisor 2
Nadya Morozova
email :
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phone : +33 169085315
Subjects / Tools-Methodologies
1 : Network and pathway analysis/ Systems Biology
2 : Bioinformatics/ Computer Science
3 : Cancer Biology/ Complex Systems
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Date : 04/04/2011
Laboratory
Matière et Systèmes Complexes (MSC)
UMR 7057 CNRS Paris-Diderot
Batiment Condorcet case 7056
Université Paris Diderot
10 rue Alice Domon et Léonie Duquet
75205 Paris cedex 13
Website : http://www.msc.univ-paris-diderot.fr
Main disciplin : Physics
Director : Loïc Auvray
PhD Supervisor
Alain Ponton
email :
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phone : + 33 1 57 27 61 96
Subjects
1.: Nanocomposites
2.: Biotechnology
3.: Engineering tissue
Tools and methodologies
1.: Synthesis of nanoparticles and nanocomposites biomaterials
2.: Mechanical study
3.: Bioactivity
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Date : 23/03/2011
Laboratory
Wave front engineering microscopy group, Neurophysiology and new microscopy laboratory
UMR8154
CNRS, INSERM, University Paris Descartes
45, rue des Saints Pères
75006 Paris
Website : http://www.biomedicale.univ-paris5.fr/neurophysiologie/Groups/emilianigroup.php
Main discipline : Physics
Lab director : Serge Charpak
PhD Supervisor
Valentina Emiliani
email :
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phone : + 33 142864253
Subjects
1.: optogenetics
2.: voltage sensitive dyes
3.: brain connectivity
Tools and methodologies
1.: two photon excitation
2.: holographic light patterning
3.: temporal focusing
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Date : 17/03/2011
Laboratory
IR4M UMR8081
CNRS Université Paris Sud
Bat 220
91405 Orsay
Website : http://ir4m/www.u-psud.fr
Main discipline : Physics
Lab director : Luc Darrasse
PhD Supervisor
Geneviève Guillot
email :
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phone : +33.1 69 15 67 46
Subjects
1.: cortical bone
2.: trabecular bone
3.: mechanical properties
Tools and methodologies
1.: Magnetic Resonance Imaging
2.: x ray high resolution tomography
3.: digital image correlation
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Date : 10/03/2011
Laboratory
MICALIS Institute (Food and Gut Microbiology for Human Health)
UMR1319 INRA AMIPEM Team
Domaine de Vilvert Building 440
78350 Jouy-en-Josas
Website
Main discipline : Molecular Biology
Lab director : Stéphane Aymerich
PhD Supervisor
Philippe Gérard
email :
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phone : +33.1 34 65 24 28
Subjects
1.: obesity, metabolic syndrome
2.: gut microbiota
3.: germfree animals
Tools and methodologies
1.: metagenomics
2.: metabolomics
3.: statistics
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Date : 08/03/2011
Laboratory
UMMISCO
UMI 209 IRD
32, avenue Henry Varagnat
93143 Bondy
Website : http://www.ummisco.ird.fr
Main discipline : Epidemiology
Lab director : Pierre Auger
PhD Supervisor
Dr Benjamin Roche
email :
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phone : +33.6.29.58.54.60
Subjects
1.: Epidemiological and Evolutionary dynamics
2.: Ecological and Evolutionary traps
Tools and methodologies
1.: Stochastic models
2.: Individual Based Models
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Date : 03/03/2011
Laboratory
Equipe Avenir - Pathogenèse infectieuse des vaisseaux
U970 INSERM
56 Rue Leblanc
75015 Paris
Website : http://parcc.inserm.fr
Main discipline : Cell Biology
Lab director : Alain Tedgui
PhD Supervisor
Guillaume Dumenil
email :
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phone : +33 1 53 98 80 49
Subjects
1.: Meningitis
2.: Cerebral microcirculation
3.: Neisseria meningitidis
Tools and methodologies
1.: Cellular microbiology
2.: Microfluidics
3.: Live imaging
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Date : 27/02/2011
Laboratory
Membrane dynamics and Intracellular Traffic
UMR 7592-Institut Jacques Monod CNRS
Université Paris Diderot
Bât.Buffon - 15 rue Hélène Brion
75205 PARIS
Director : Catherine Jackson
Main discipline : Cell Biology
Website : http://www.lebs.cnrs-gif.fr/jackson/jackson_eng.html currently;
the Jackson group will move to the IJM in June, 2011: http://www.ijm.fr/ijm/institut/presentation/
PhD Supervisor
Catherine Jackson
email :
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phone : +33 1 69 82 34 91
Subjects
1.: Membrane curvature sensors
2.: Vesicular trafficking
3.: Biomolecular engineering
Tools and methodologies
1.: Live cell imaging/FRET/TIRF microscopy and cell culture
2.: Design and purification of bioprobes
3.: Liposome binding assays (Fluorescence, flotation)
Available funding for this project
My group currently has funding from the ANR and FRM, and Bruno Antonny has been awarded a highly competitive ERC Advanced Grant.
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Date : 25/02/2011
Laboratory 1
Bacterial Cytoskeleton and Bacterial Cell Morphogenesis Lab
UMR 1319 - Micalis INRA AgroParisTech
INRA Domaine de Vilvert
78352 Jouy-en-Josas Cedex
Director : Stéphane Aimerich
Main discipline : Systems Biology
Lab's website
PhD Supervisor 1
Rut CARBALLIDO LOPEZ
email :
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phone : +33 1 34.65.25.34
Laboratory 2
Biology Systems Lab
U1077 - Unité Mathématique, Informatique et Génome (MIG)
INRA Domaine de Vilvert
78352 Jouy-en-Josas Cedex
Director : Jean-François GIBRAT
Main discipline : Systems Biology
Lab's website
PhD Supervisor 2
Vincent FROMION
email :
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phone : +33 1 34.65.28.81
Subjects
1.: Bacterial cell wall, bacterial cell morphogenesis, peptidoglycan
2.: Systems Biology
3.: Genetic modules, dynamic data, global control mechanisms of complex biological functions
1.: Transcriptomics -Tiling Array, Live Cell Array (LCA)
2.: Modeling, Mathematics, Statistics
3.: Genetics, Molecular Biology, Cell Biology, Biophysics, Microscopy
Available funding for this project
HFSP Young Investigator Grant (PI) , ANR Jeune Chercheur (PI), European - BaSyntech (partner)
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Date : 14/02/2011
Laboratory
Ecology & Evolution
UMR 7625 CNRS- UPMC-ENS
Ecole Normale Supérieure
46 rue d'Ulm 75230 PARIS
Director : Minus Van Baalen
Main discipline : Epidemiology
Lab's website
PhD Supervisor
Bernard Cazelles
email :
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phone : +33 1 44 32 38 76
Subjects
1.: Epidemiological and Evolutionary dynamics
2.: Influenza Epidemics
Tools-Methodologies:
1.: Stochastic models
2.: Individual Based Models
3.: Bayesian inference
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Date : 14/03/2011
Laboratory
Centre de Génétique Moléculaire du CNRS
RNA structure and dynamics group
1 Av. de la Terrasse, Bât. 26
91198 Gif-sur-Yvette
Director : Frédéric Boccard
PhD Supervisor
Dominique Fourmy
Email:
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Phone: +33 1 69 82 38 84
Subjects / Tools-Methodologies
1: translation/fluorescence microscopy, single molecule imaging
2: protein synthesis initiation/fluorescence microscopy, single molecule imaging
2: molecular motor/fluorescence microscopy, single molecule imaging
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Date : 14/02/2011
Laboratory
Ecologie, Systematique & Evolution
UMR CNRS 8079 University Paris XI - Agroparistech
Bat 362 - Université Paris XI
91405 ORSAY cedex
Director : Paul Leadley
Main discipline : Ecology
Lab's website
PhD Supervisor
Franck Courchamp
email :
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phone : +33 1 69 15 56 85
Subjects
1.: Conservation Biology
2.: Biodiversity
3.: Human and Social Sciences
Tools-Methodologies:
1.: Mathematical modelling (eg. in ecology and/or economics)
2.: Large dataset statistical analyses
3.: Experimental settings
Available funding for this project
The PhD student will benefit from the funding of the ANR on this subject during the totality of his/her PhD thesis
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Date : 03/02/2011
Laboratory
Groupe Imagerie et Modélisation
URA 2582 - Institut Pasteur
25 rue du Docteur Roux 75015 Paris
Director : Christophe ZIMMER
PhD Supervisor
Christophe ZIMMER
email :
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phone : +33 1 40 61 38 91
Subjects
1.: super-resolution microscopy
2.: single molecule imaging
3.: chromatin, HIV
Tools-Methodologies:
1.: image processing
2.: optics and electronics
3.: chemistry
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Date : 03/02/2011
Laboratory
Integrative biology of human dendritic cells and T cells
Inserm U932 - Institut Curie
26 rue d'Ulm 75005 Paris
Director : Vassili Soumelis
PhD Supervisor
Vassili Soumelis
email :
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phone : +33 1 44 32 42 27
Subjects
1.: Systems biology
2.: Immunology
3.: Cell biology
Tools-Methodologies:
1.: Cellular immunology
2.: Computational biology
3.: Mathematical modeling
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Date : 03/02/2011
Laboratory
Theoretical Modeling of Cellular Physiology
UMR 8542
Ecole Normale Supérieure
46 rue d'Ulm 75005 Paris
Director : David HOLCMAN
PhD Supervisor
David HOLCMAN
email :
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phone : +33 1 44 32 36 61
Subjects
1.: heart
2.: modeling
3.: data analysis
Tools-Methodologies:
1.: modeling, simulations
2.: data analysis
3.: engineering
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Date : 01/02/2011
Laboratory
LNC, Laboratoire de Neurosciences Cognitives
INSERM U960, ENS
29 rue d'Ulm 75005 Paris
Director : Etienne Koechlin
website : www.lnc.ens.fr
Team
GNT, Group for Neural Theory
team leader : Boris Gutkin
website : www.gnt.ens.fr
PhD Supervisor
Boris Gutkin
email :
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phone : +33 1 44 32 26 59
Subjects / Tools-Methodologies
1 : computational neuroscience/dynamical systems
2 : dynamical systems/statistical theory
3 : biomathematics/computer simulations
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Date : 01/02/2011
Laboratory
LIP6
UMR 7606 / CNRS / UPMC
104 avenue du Pdt Kennedy
F - 75016 Paris
Director : Patrick Gallinari
website : LIP6
Thesis Supervisor
Matthieu Latapy
email :
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tél : + 33 1 44 27 87 84
Subjects / Tools-Methodologies
1. Networks / graph theory
2. Diffusion phenomena / probabilities
3. Measurement / computer science
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Date : 02/02/2011
Laboratory
LACL
Université Paris 12 - EA 4213
Bâtiment P2 - 240
Faculté des Sciences et technologies
61 rue du Général de Gaulle
94010 Créteil cedex
Director : Régine LALEAU
PhD Supervisor
Olivier MICHEL
email :
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phone : +33 1 45 17 16 35
Subjects / Tools-Methodologies:
1 : A language for synthetic biology
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Date : 27/01/2011
Laboratory
Laboratoire de Physique Statistique de l'ENS UMR CNRS 8550
Ecole Normale Superieure, 24 rue Lhomond 75005 Paris
Director : Mr Eric PEREZ
Main discipline : Biophysics
http://www.lps.ens.fr
PhD Supervisor
Wladimir URBACH
email :
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phone : +33 6 88 58 09 78
Subjects
1.: amyloid peptides
2.: beta-Lactoglobulin
3.: hydration
Tools-Methodologies
1.: ultrasound
2.: density measurments
3.: all atom molecular dynamics
Link to 2010/11 labs PhD proposals